Epigenomics & Gene Regulation
Answers 'who regulates these genes' — four ways to use ChIP-Atlas.
Lessons
05-01 · Peak Enrichment (genes → TF)
Given a gene set, which TFs are enriched over it.
05-02 · Target Genes (TF → genes)
Pre-computed target genes for any transcription factor.
05-03 · Differential Peaks / DMR
Compare two groups for differential peaks or methylation.
05-04 · Upstream Regulator Analysis
Combine ChIP-Atlas binding with DE to find driver TFs.