{
  "id": "skill_dd3e525ed3e84cb9a73aa45781117110",
  "name": "chip-atlas-peak-enrichment",
  "description": "Analyze enrichment of ChIP-seq peaks from 433,000+ experiments via the ChIP-Atlas API.",
  "category": "epigenomics",
  "owner_type": "system",
  "created_by_name": "Phylo",
  "verified": false,
  "icon": "flask",
  "keywords": [],
  "default_message": "Find ChIP-seq peak enrichment near my genes using ChIP-Atlas database . .",
  "created_at": "2026-04-29T03:43:33.602000",
  "updated_at": "2026-06-02T00:56:00.071000",
  "entrypoint": "SKILL.md",
  "supporting_files": {
    "references/chipatlas_metadata_format.md": {
      "size": 3730,
      "type": "md",
      "modified": 1777001731,
      "can_edit": false,
      "editor_kind": null
    },
    "references/enrichment_statistics.md": {
      "size": 4859,
      "type": "md",
      "modified": 1777001731,
      "can_edit": false,
      "editor_kind": null
    },
    "references/peak_thresholds.md": {
      "size": 2251,
      "type": "md",
      "modified": 1777001731,
      "can_edit": false,
      "editor_kind": null
    },
    "references/promoter_definitions.md": {
      "size": 2040,
      "type": "md",
      "modified": 1777001731,
      "can_edit": false,
      "editor_kind": null
    },
    "scripts/__init__.py": {
      "size": 45,
      "type": "py",
      "modified": 1777001731,
      "can_edit": false,
      "editor_kind": null
    },
    "scripts/convert_genes_to_regions.py": {
      "size": 8274,
      "type": "py",
      "modified": 1777001731,
      "can_edit": false,
      "editor_kind": null
    },
    "scripts/export_all.py": {
      "size": 24893,
      "type": "py",
      "modified": 1777001731,
      "can_edit": false,
      "editor_kind": null
    },
    "scripts/filter_experiments.py": {
      "size": 3926,
      "type": "py",
      "modified": 1777001732,
      "can_edit": false,
      "editor_kind": null
    },
    "scripts/generate_all_plots.py": {
      "size": 9807,
      "type": "py",
      "modified": 1777001732,
      "can_edit": false,
      "editor_kind": null
    },
    "scripts/load_example_data.py": {
      "size": 3512,
      "type": "py",
      "modified": 1777001732,
      "can_edit": false,
      "editor_kind": null
    },
    "scripts/load_user_data.py": {
      "size": 5224,
      "type": "py",
      "modified": 1777001732,
      "can_edit": false,
      "editor_kind": null
    },
    "scripts/query_chipatlas_api.py": {
      "size": 10238,
      "type": "py",
      "modified": 1777001732,
      "can_edit": false,
      "editor_kind": null
    },
    "scripts/run_enrichment_workflow.py": {
      "size": 9952,
      "type": "py",
      "modified": 1777001732,
      "can_edit": false,
      "editor_kind": null
    }
  },
  "_category_display": "Epigenomics"
}