{
  "id": "skill_1af241ccbf5244f1b7125bc7bca91685",
  "name": "protein-human-mouse-struct-collector",
  "description": "Collect all human and mouse UniProt entries, PDB experimental structures, and AlphaFold predicted structures for any protein of interest. Downloads PDB and AlphaFold CIF files (with species-aware naming), fetches full-field JSON metadata from RCSB PDB Data API and AlphaFold EBI API, generates two Excel files (UniProt-only and comprehensive UniProt+PDB+AlphaFold), produces a detailed Markdown report plus a reproducible Jupyter notebook, and generates AlphaFold3 input JSON files for every sequence source (PDB experimental, AlphaFold predicted, and UniProt) paired with any user-specified ligand. Use this skill whenever someone asks to collect, download, or summarize structural data for a protein across human and mouse, or to generate AF3 input JSON files for all available sequences of a protein with a ligand.",
  "category": "general",
  "owner_type": "user",
  "created_by_name": "Uazbrz Yonjlj",
  "verified": false,
  "icon": "flask",
  "keywords": [],
  "default_message": "",
  "created_at": "2026-05-11T15:21:05.051000",
  "updated_at": "2026-06-02T00:55:35.740000",
  "entrypoint": "SKILL.md",
  "supporting_files": {
    "notebook_template.ipynb": {
      "type": "ipynb",
      "can_edit": false,
      "editor_kind": null
    }
  },
  "_category_display": "General"
}